halophFGD

Basic Information

Locus ID: CH02.488

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: G-type lectin S-receptor-like serine threonine-protein kinase SD2-5

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH02	4170848	4172876	+	CH02.488

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.85	46,472.67 Da	40.68	86.50	-0.18

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	296	377	3.5E-20	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	292	377	4.59E-30	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	288	379	3.2E-30	-
SMART	SM00220	serkin_6	220	420	9.2E-6	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	94	420	15.693701	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	316	328	-	IPR008271
MobiDBLite	mobidb-lite	consensus disorder prediction	1	25	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	17	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G32300.1	S-domain-2 5.	1.55E-27
RefSeq	XP_034593455.1	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Setaria viridis]	2.83E-81
Swiss-Prot	Q8RWZ5	G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1	1.54E-26
TrEMBL	A0A368R502	Receptor-like serine/threonine-protein kinase OS=Setaria italica OX=4555 GN=SETIT_5G144200v2 PE=3 SV=1	6.4E-80

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for CH02.488.