Basic Information
Locus ID:
CH02.487
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 4138770 | 4142172 | - | CH02.487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 44,242.49 Da | 70.53 | 64.95 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 354 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29079 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30231180 |
| Apiaceae | Apium graveolens | 1 | Ag1G00397 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G003380, COCNU_08G002620 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103706822, gene-LOC103708666, gene-LOC120112361 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G11843 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G60080.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10006114m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g03130.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g074400.2N |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno02g04150, gene.Cymno03g10680, gene.Cymno05g11760 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g06490 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00016882, Pov_00031121 |
| Poaceae | Echinochloa crus-galli | 6 | AH02.3218, BH08.1851, CH02.1238, CH02.4643, CH02.487 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0633530, gene-QOZ80_8BG0662680 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0671600.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco15G013120, Oco16G009400 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g36170.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G160700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0403256 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr16G015470, Chr17G014900, Chr20G004450, Chr29G004250 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G384000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG026680, gene_TRIDC7BG017250 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G211800.1.cds1, TraesCS7B02G118700.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb406020_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-17156, nbis-gene-47761 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g23109, Zma_g24193 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g25170, gene.Posoc02g25540 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636059 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107031828 |
| Zosteraceae | Zostera marina | 2 | Zosma03g31060.v3.1, Zosma04g18240.v3.1 |