halophFGD

Basic Information

Locus ID: CH02.4566

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Nascent polypeptide-associated complex subunit alpha-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH02	47544853	47546029	+	CH02.4566

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.36	21,530.76 Da	49.54	78.18	-0.62

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14358	UBA_NAC_euk	155	191	2.16231E-16	-
Pfam	PF19026	HYPK UBA domain	153	191	9.4E-13	IPR044034
Pfam	PF01849	NAC domain	62	112	9.9E-17	IPR002715
Gene3D	G3DSA:2.20.70.30	-	66	116	2.0E-20	IPR038187
Gene3D	G3DSA:1.10.8.10	-	153	190	1.2E-17	-
SMART	SM01407	NAC_2	59	114	1.7E-16	IPR002715
PIRSF	PIRSF015901	NAC_alpha	23	192	2.6E-40	IPR016641
ProSiteProfiles	PS51151	NAC A/B domain profile.	56	120	12.633103	IPR002715
MobiDBLite	mobidb-lite	consensus disorder prediction	24	43	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	16	57	-	-

Gene Ontology

Cellular Component:

GO:0005854 (nascent polypeptide-associated complex)

KEGG Pathway

KO Term:

K03626 (nascent polypeptide-associated complex subunit alpha)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G12390.1	Nascent polypeptide-associated complex (NAC), alpha subunit family protein.	1.02E-50
RefSeq	XP_015622168.1	nascent polypeptide-associated complex subunit alpha-like protein 1 [Oryza sativa Japonica Group]	2.75E-57
Swiss-Prot	Q9LHG9	Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1	9.87E-50
TrEMBL	Q7F347	Os01g0938900 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0938900 PE=4 SV=1	6.21E-56

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg15786, jg2111, jg31413, jg33198, jg33199
Aizoaceae	Mesembryanthemum crystallinum	2	gene_16315, gene_9856
Amaranthaceae	Atriplex hortensis	4	Ah006727, Ah006728, Ah006816, Ah018468
Amaranthaceae	Beta vulgaris	2	BVRB_2g023790, BVRB_3g050890
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg14942, Sbi_jg16061, Sbi_jg55748, Sbi_jg56921
Amaranthaceae	Salicornia europaea	2	Seu_jg24723, Seu_jg26271
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00008005, GOSA_00017871
Amaranthaceae	Suaeda glauca	4	Sgl06276, Sgl25174, Sgl30356, Sgl71185
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000002428, gene:ENSEOMG00000004217 ... gene:ENSEOMG00000011279, gene:ENSEOMG00000027913, gene:ENSEOMG00000032671, gene:ENSEOMG00000040128, gene:ENSEOMG00000043864
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0006420, CQ.Regalona.r1.3BG0006490 ... CQ.Regalona.r1.4AG0014330, CQ.Regalona.r1.4BG0013290
Anacardiaceae	Pistacia vera	2	pistato.v30074660, pistato.v30262970
Apiaceae	Apium graveolens	8	Ag10G02209, Ag2G01559, Ag2G01560, Ag2G02139, Ag3G01459 ... Ag4G02601, Ag8G01921, AgUnG01497
Arecaceae	Cocos nucifera	5	COCNU_04G008840, COCNU_07G008360, COCNU_10G006290 ... COCNU_12G004800, COCNU_16G002790
Arecaceae	Phoenix dactylifera	6	gene-LOC103702764, gene-LOC103705105, gene-LOC103711709 ... gene-LOC103720377, gene-LOC103722855, gene-LOC120106215
Asparagaceae	Asparagus officinalis	1	AsparagusV1_08.2938.V1.1
Asteraceae	Flaveria trinervia	5	Ftri11G20294, Ftri12G31126, Ftri18G06375, Ftri1G06931 ... Ftri3G12877
Brassicaceae	Arabidopsis thaliana	5	AT1G33040.1, AT3G12390.1, AT3G49470.1, AT4G10480.1 ... AT5G13850.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10010701m.g.v1.0, Thhalv10014708m.g.v1.0 ... Thhalv10021544m.g.v1.0, Thhalv10029431m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp3g10580.v2.2, Sp5g12610.v2.2, Sp6g06980.v2.2 ... Sp6g30150.v2.2
Brassicaceae	Brassica nigra	8	BniB01g030360.2N, BniB01g052600.2N, BniB02g048730.2N ... BniB05g058460.2N, BniB07g025880.2N, BniB07g056370.2N, BniB08g035870.2N, BniB08g052190.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq05G0948, Ceq09G1691
Casuarinaceae	Casuarina glauca	2	Cgl05G0949, Cgl09G1827
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno03g13600, gene.Cymno03g13640
Dunaliellaceae	Dunaliella salina	2	Dusal.0297s00004.v1.0, Dusal.3768s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate05g00980
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11651, nbisL1-mrna-3705, nbisL1-mrna-8174
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.2064, evm.TU.LG05.1299
Plantaginaceae	Plantago ovata	4	Pov_00000622, Pov_00011115, Pov_00014760, Pov_00041220
Plumbaginaceae	Limonium bicolor	3	Lb1G04037, Lb1G07138, Lb4G21852
Poaceae	Echinochloa crus-galli	12	AH01.3630, AH01.5114, AH02.4466, AH05.2691, BH01.3976 ... BH01.5096, BH01.5250, BH02.4516, BH05.2786, CH01.4246, CH02.4566, CH05.2873
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_3AG0231530, gene-QOZ80_3AG0248310 ... gene-QOZ80_3BG0279930, gene-QOZ80_3BG0296360, gene-QOZ80_5AG0375570, gene-QOZ80_5BG0422910
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0059770.1, HORVU.MOREX.r3.2HG0109280.1 ... HORVU.MOREX.r3.3HG0316960.1, HORVU.MOREX.r3.4HG0412610.1
Poaceae	Lolium multiflorum	7	gene-QYE76_013786, gene-QYE76_057816, gene-QYE76_057817 ... gene-QYE76_057851, gene-QYE76_057853, gene-QYE76_067844, gene-QYE76_071299
Poaceae	Oryza coarctata	7	Oco01G029580, Oco02G030760, Oco05G001280, Oco06G001240 ... Oco09G008060, Oco10G008280, Oco10G008290
Poaceae	Oryza sativa	4	LOC_Os01g71230.1, LOC_Os03g02960.1, LOC_Os05g31000.1 ... LOC_Os07g22450.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G354300, gene-BS78_01G501700 ... gene-BS78_06G105500
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0102732, Pt_Chr0505287, Pt_Chr0600761
Poaceae	Sporobolus alterniflorus	11	Chr01G021700, Chr01G034680, Chr01G038620, Chr01G038910 ... Chr04G011400, Chr07G010800, Chr12G000750, Chr12G004950, Chr12G016600, Chr18G007540, Chr22G009950
Poaceae	Thinopyrum elongatum	9	Tel1E01G393700, Tel3E01G761000, Tel3E01G761100 ... Tel3E01G762000, Tel3E01G762100, Tel3E01G762200, Tel3E01G762700, Tel4E01G264000, Tel4E01G569300
Poaceae	Triticum dicoccoides	11	gene_TRIDC1AG035350, gene_TRIDC1BG040820 ... gene_TRIDC3AG066780, gene_TRIDC3BG075590, gene_TRIDC3BG075600, gene_TRIDC3BG075660, gene_TRIDC3BG075710, gene_TRIDC4AG019470, gene_TRIDC4BG029440, gene_TRIDC4BG058480, gene_TRIDC5AG073570
Poaceae	Triticum aestivum	23	TraesCS1B02G248000.1, TraesCS1D02G236500.1 ... TraesCS3A02G474200.1, TraesCS3A02G474500.1, TraesCS3A02G474600.1, TraesCS3A02G474800.1, TraesCS3A02G474900.1, TraesCS3B02G517400.1, TraesCS3B02G517500.1, TraesCS3B02G518000.1, TraesCS3B02G518200.1, TraesCS3B02G518300.1, TraesCS3B02G518400.1, TraesCS3D02G470500.1, TraesCS3D02G470600.2, TraesCS4A02G138000.1, TraesCS4B02G154200.1, TraesCS4B02G347400.1, TraesCS4D02G164400.1, TraesCS4D02G342400.1, TraesCS5A02G516100.1, TraesCSU02G140000.1, TraesCSU02G140100.1
Poaceae	Zea mays	4	Zm00001eb016960_P002, Zm00001eb175220_P001 ... Zm00001eb394670_P001, Zm00001eb403780_P001
Poaceae	Zoysia japonica	4	nbis-gene-1573, nbis-gene-3113, nbis-gene-38748 ... nbis-gene-38794
Poaceae	Zoysia macrostachya	5	Zma_g1205, Zma_g2211, Zma_g26741, Zma_g28111, Zma_g28130
Portulacaceae	Portulaca oleracea	7	evm.TU.LG02.1398, evm.TU.LG06.1404, evm.TU.LG09.564 ... evm.TU.LG11.735, evm.TU.LG18.1339, evm.TU.LG20.548, evm.TU.LG20.549
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g09640, gene.Posoc02g33410
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_1_RagTag.687, evm.TU.Scaffold_7_RagTag.1578 ... evm.TU.Scaffold_8_RagTag.228, evm.TU.Scaffold_9_RagTag.227
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-10088, nbisL1-mrna-19890, nbisL1-mrna-21947 ... nbisL1-mrna-7414
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-19386, nbisL1-mrna-7491, nbisL1-mrna-8537
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-13511, nbisL1-mrna-17855, nbisL1-mrna-18596 ... nbisL1-mrna-18598
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000002l.126, evm.TU.utg000003l.665 ... evm.TU.utg000018l.847
Rhizophoraceae	Kandelia obovata	2	Maker00002902, Maker00009642
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-13177, nbisL1-mrna-3159, nbisL1-mrna-6777 ... nbisL1-mrna-8364
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11377, nbisL1-mrna-12268, nbisL1-mrna-12569 ... nbisL1-mrna-809
Salicaceae	Populus euphratica	4	populus_peu04186, populus_peu10766, populus_peu27933 ... populus_peu29359
Solanaceae	Lycium barbarum	4	gene-LOC132607322, gene-LOC132607595, gene-LOC132620198 ... gene-LOC132632192
Solanaceae	Solanum chilense	2	SOLCI005229000, SOLCI005762800
Solanaceae	Solanum pennellii	3	gene-LOC107002589, gene-LOC107002812, gene-LOC107015078
Tamaricaceae	Reaumuria soongarica	4	STRG.24488_chr08_-, gene_17937, gene_3056, gene_5027
Tamaricaceae	Tamarix chinensis	3	TC05G2442, TC05G2443, TC06G2738
Zosteraceae	Zostera marina	1	Zosma04g20750.v3.1