Basic Information
Locus ID:
CH02.4517
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 47286173 | 47286891 | + | CH02.4517 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 20,668.96 Da | 48.74 | 75.67 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034594811.1 | uncharacterized protein LOC117856587 [Setaria viridis] | 1.32E-58 |
| TrEMBL | K3XTE0 | RING-type domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 1.85E-57 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH02.4430, AH02.4436, BH02.4470, BH02.4476, CH02.4517 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G395500 |
| Poaceae | Zea mays | 7 | Zm00001eb141740_P001, Zm00001eb141780_P001 ... |