Basic Information
Locus ID:
CH02.421
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 3611251 | 3664625 | + | CH02.421 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 57,863.68 Da | 34.83 | 83.75 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 112 | 470 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 115 | 265 | 6.0E-43 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 313 | 421 | 4.9E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 439 | 1.48E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 438 | 1.5E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 199 | 2.0E-33 | - |
| SMART | SM00220 | serkin_6 | 114 | 421 | 4.0E-103 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 114 | 421 | 46.717831 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 422 | 479 | 8.789936 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 120 | 143 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 233 | 245 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.2 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 2.23E-257 |
| RefSeq | XP_025815051.1 | serine/threonine-protein kinase tricorner-like [Panicum hallii] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 1.09E-131 | |
| TrEMBL | A0A3L6QY69 | Serine/threonine-protein kinase tricorner OS=Panicum miliaceum OX=4540 GN=C2845_PM08G03020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology