Basic Information
Locus ID:
CH02.3738
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 41260627 | 41265404 | - | CH02.3738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 72,043.32 Da | 47.86 | 90.35 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 4.0E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 371 | 622 | 3.3E-25 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 371 | 622 | 8.99E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 157 | 9.23E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 633 | 3.9E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 194 | 3.2E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 332 | 440 | 7.6E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 626 | 19.36854 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 216 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 7.47E-149 |
| RefSeq | XP_034597689.1 | protein MALE DISCOVERER 1-like [Setaria viridis] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 2.83E-145 | |
| TrEMBL | A0A1E5UWI2 | Protein MALE DISCOVERER 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0021756 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology