Basic Information
Locus ID:
CH02.34
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 408936 | 411724 | - | CH02.34 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 90,633.84 Da | 35.37 | 101.90 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 528 | 748 | 3.2E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 424 | 1.19E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 506 | 825 | 1.16E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 492 | 614 | 1.5E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 88 | 1.9E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 89 | 160 | 1.5E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 161 | 451 | 2.8E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 615 | 844 | 6.2E-55 | - |
| SMART | SM00220 | serkin_6 | 526 | 829 | 2.7E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 829 | 36.72509 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 665 | 677 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 532 | 555 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 846 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 2.16E-144 |
| RefSeq | XP_039845692.1 | receptor-like protein kinase HSL1 [Panicum virgatum] | 4.08E-182 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 2.1E-143 | |
| TrEMBL | A0A2T7DTJ2 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G543900 PE=3 SV=1 | 2.36E-183 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology