Basic Information
Locus ID:
CH02.3317
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 37587424 | 37590646 | - | CH02.3317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 110,338.98 Da | 42.20 | 96.43 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 269 | 327 | 4.7E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 7.9E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 683 | 970 | 9.2E-43 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 75 | 133 | 3.0E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 466 | 518 | 2.3E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 148 | 206 | 6.9E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 971 | 5.33E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 77 | 404 | 5.57E-63 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 328 | 575 | 1.33E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 594 | 2.7E-73 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 676 | 763 | 3.9E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 312 | 4.8E-76 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 994 | 7.7E-61 | - |
| SMART | SM00220 | serkin_6 | 680 | 971 | 5.4E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 170 | 194 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 144 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 481 | 505 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 529 | 552 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 290 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 340 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 76.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 680 | 972 | 37.191513 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 823 | 835 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 686 | 713 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 123 | 136 | 3.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 529 | 542 | 3.4E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 9.95E-111 |
| RefSeq | XP_034593991.1 | receptor-like protein kinase HSL1 isoform X1 [Setaria viridis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 3.25E-68 | |
| TrEMBL | A0A2T7DH02 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G164900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology