Basic Information
Locus ID:
CH02.3314
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 37569366 | 37571928 | - | CH02.3314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 84,849.81 Da | 38.18 | 95.64 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 161 | 219 | 6.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 307 | 365 | 1.2E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 88 | 146 | 1.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 584 | 690 | 2.4E-25 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 83 | 5.7E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 405 | 524 | 1.81E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 88 | 196 | 5.21E-17 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 571 | 748 | 2.43E-45 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 161 | 397 | 1.62E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 303 | 401 | 5.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 201 | 302 | 3.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 200 | 1.2E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 564 | 770 | 2.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 402 | 532 | 1.0E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 256 | 280 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 518 | 749 | 6.8E-7 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 109 | 132 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 352 | 376 | 8.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 6.3 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 389 | 749 | 21.27663 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 600 | 612 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 112 | 125 | 9.6E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 256 | 269 | 9.6E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 6.55E-65 |
| RefSeq | XP_022682700.1 | receptor-like protein kinase 5 [Setaria italica] | 4.54E-150 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 3.28E-45 | |
| TrEMBL | A0A3L6QVA1 | Leucine-rich repeat receptor-like protein kinase PXL2 OS=Panicum miliaceum OX=4540 GN=C2845_PM08G25110 PE=3 SV=1 | 2.05E-171 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology