Basic Information
Locus ID:
CH02.3298
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 37463462 | 37465063 | + | CH02.3298 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.50 | 37,057.28 Da | 75.04 | 55.89 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 330 | 4.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 191 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 263 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25760.1 | Protein kinase family protein. | 2.07E-14 |
| RefSeq | XP_039810038.1 | casein kinase 1-like protein HD16 [Panicum virgatum] | 1.67E-41 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 1.65E-10 | |
| TrEMBL | A0A8T0S484 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG492200 PE=4 SV=1 | 3.78E-40 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB02g011910.2N |
| Poaceae | Echinochloa crus-galli | 1 | CH02.3298 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-26882, nbis-gene-35699 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8815 |