Basic Information
Locus ID:
CH02.323
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 2724664 | 2726843 | + | CH02.323 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 64,821.60 Da | 55.25 | 75.38 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 283 | 532 | 1.2586E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 279 | 532 | 2.0E-58 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 255 | 532 | 5.06E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 359 | 1.3E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 360 | 543 | 4.0E-62 | - |
| SMART | SM00220 | serkin_6 | 276 | 539 | 1.2E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 276 | 539 | 43.565948 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 400 | 412 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 459 | 481 | 5.9E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 356 | 369 | 5.9E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 394 | 412 | 5.9E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 503 | 525 | 5.9E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 440 | 450 | 5.9E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 139 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 123 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 1.17E-143 |
| RefSeq | XP_039846078.1 | serine/threonine/tyrosine-protein kinase HT1-like [Panicum virgatum] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 3.65E-94 | |
| TrEMBL | A0A8T0SA29 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG045400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology