Basic Information
Locus ID:
CH02.3122
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 36150629 | 36154865 | + | CH02.3122 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 69,491.82 Da | 47.95 | 73.90 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 505 | 621 | 1.9E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 504 | 619 | 7.15E-19 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 310 | 501 | 3.95E-22 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 83 | 124 | 4.82E-5 | IPR009060 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 499 | 627 | 8.6E-28 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 301 | 410 | 4.9E-5 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 78 | 126 | 2.5E-7 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 81 | 124 | 10.329961 | IPR015940 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 504 | 628 | 21.25178 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 182 | 226 | 8.619066 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 301 | 627 | 128.971863 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 262 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 2.14E-168 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 3.9E-270 | |
| TrEMBL | K4A7C3 | SAM-dependent MTase DRM-type domain-containing protein OS=Setaria italica OX=4555 GN=101784586 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology