Basic Information
Locus ID:
CH02.2809
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 33699711 | 33703372 | + | CH02.2809 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 42,256.09 Da | 41.78 | 81.41 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 84 | 352 | 1.82077E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 80 | 352 | 1.5E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 352 | 1.24E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 161 | 3.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 370 | 3.7E-62 | - |
| SMART | SM00220 | serkin_6 | 78 | 355 | 1.4E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 78 | 355 | 41.304508 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 219 | 231 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 279 | 301 | 5.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 213 | 231 | 5.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 323 | 345 | 5.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 175 | 188 | 5.4E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 57 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 1.07E-220 |
| RefSeq | XP_025817122.1 | serine/threonine-protein kinase STY13-like [Panicum hallii] | 5.92E-281 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 1.02E-219 | |
| TrEMBL | A0A3L6SNE8 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM07G16910 PE=4 SV=1 | 2.82E-281 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology