Basic Information
Locus ID:
CH02.2725
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 32305816 | 32309934 | + | CH02.2725 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 61,837.88 Da | 45.76 | 81.10 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 193 | 459 | 3.69061E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 188 | 456 | 1.8E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 171 | 461 | 5.4E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 170 | 262 | 1.5E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 263 | 476 | 2.5E-64 | - |
| SMART | SM00220 | serkin_6 | 187 | 458 | 8.7E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 187 | 466 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 309 | 321 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 193 | 216 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42960.1 | Protein kinase superfamily protein. | 1.46E-214 |
| RefSeq | XP_004969248.1 | probable receptor-like protein kinase At2g42960 [Setaria italica] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 1.4E-213 | |
| TrEMBL | A0A3L6SQF9 | Putative receptor-like protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM07G16620 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology