Basic Information
Locus ID:
CH02.2670
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Voltage-dependent anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 31632049 | 31642824 | - | CH02.2670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 115,715.62 Da | 57.28 | 83.13 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 691 | 993 | 4.05353E-122 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 692 | 994 | 4.3E-51 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 688 | 1004 | 7.5E-72 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1045 | 1059 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1035 | 1067 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 172 | - | - |
| Coils | Coil | Coil | 476 | 496 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24030.1 | SLAC1 homologue 3. Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane. | 1.06E-182 |
| RefSeq | XP_025818987.1 | S-type anion channel SLAH2-like [Panicum hallii] | 0 |
| Q9FLV9 | S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1 | 1.02E-181 | |
| TrEMBL | A0A1E5V8Y8 | S-type anion channel SLAH3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017515 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology