Basic Information
Locus ID:
CH02.2392
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 28594252 | 28598552 | + | CH02.2392 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.34 | 146,259.70 Da | 49.03 | 75.55 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 706 | 954 | 3.08528E-131 | - |
| Pfam | PF04548 | AIG1 family | 737 | 873 | 1.2E-23 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1099 | 1363 | 2.9E-124 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 734 | 872 | 1.76E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 708 | 957 | 1.0E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 616 | 1368 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 734 | 963 | 30.981348 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 579 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 249 | - | - |
| Coils | Coil | Coil | 1057 | 1077 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_004969392.1 | translocase of chloroplast 159, chloroplastic isoform X1 [Setaria italica] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368R8R2 | AIG1-type G domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_5G255600v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology