Basic Information
Locus ID:
CH02.2359
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 28345003 | 28347382 | + | CH02.2359 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 47,183.84 Da | 50.59 | 90.14 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 180 | 322 | 2.75E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 380 | 2.7E-7 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052141466.1 | uncharacterized protein LOC127761238 [Oryza glaberrima] | 1.94E-46 |
| TrEMBL | A0A3L6QXY4 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM08G17040 PE=4 SV=1 | 1.02E-80 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH02.2210, BH03.345, CH02.2359 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1AG0022050 |
| Poaceae | Oryza coarctata | 2 | Oco01G013310, Oco02G013450 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g40120.1, LOC_Os01g40160.1 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G453400.1 |