Basic Information
Locus ID:
CH02.2354
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 28261255 | 28262376 | - | CH02.2354 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 41,842.83 Da | 46.12 | 79.49 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_052149443.1 | uncharacterized protein LOC127767982 [Oryza glaberrima] | 1.18E-54 |
| TrEMBL | A0A4U6UL52 | DUF295 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G211400v2 PE=4 SV=1 | 1.92E-181 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag9G01941 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.2129, AH02.2130, AH02.2131, BH02.2201, BH02.2202 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_1AG0022000, gene-QOZ80_1BG0071930 ... |
| Poaceae | Oryza coarctata | 2 | Oco01G011700, Oco02G011950 |
| Poaceae | Oryza sativa | 3 | LOC_Os01g34220.1, LOC_Os01g34270.1, LOC_Os10g07430.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G174000 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr02G017010, Chr02G017020, Chr03G009610, Chr05G016520 ... |
| Poaceae | Zoysia japonica | 5 | nbis-gene-29409, nbis-gene-29411, nbis-gene-29412 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g8115, Zma_g8116 |