Basic Information
Locus ID:
CH02.235
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 2009933 | 2013625 | - | CH02.235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.31 | 74,934.64 Da | 47.06 | 93.54 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 399 | 649 | 1.8E-21 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 1.4E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 101 | 161 | 4.1E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 378 | 647 | 2.34E-34 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 163 | 1.45E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 467 | 3.4E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 178 | 2.6E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 468 | 652 | 1.5E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 653 | 17.163635 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 1.27E-151 |
| RefSeq | XP_034597159.1 | protein MALE DISCOVERER 2-like isoform X1 [Setaria viridis] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 1.54E-149 | |
| TrEMBL | K3XF88 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_5G146300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology