Basic Information
Locus ID:
CH02.2333
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 27955600 | 27959097 | - | CH02.2333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 72,959.74 Da | 39.62 | 99.55 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 449 | 706 | 2.8E-32 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 69 | 7.6E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 144 | 204 | 1.9E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 236 | 1.07E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 706 | 3.56E-49 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 403 | 509 | 1.8E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 246 | 4.0E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 182 | 5.8E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 709 | 6.1E-37 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 709 | 26.294199 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 365 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 3.6E-112 |
| RefSeq | XP_004969430.1 | LRR receptor kinase SERK2 [Setaria italica] | 4.73E-263 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 7.38E-39 | |
| TrEMBL | A0A1E5V395 | Cysteine-rich receptor-like protein kinase 5 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0019390 PE=4 SV=1 | 1.19E-262 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology