Basic Information
Locus ID:
CH02.2248
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 26658959 | 26671255 | + | CH02.2248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 167,445.14 Da | 43.81 | 84.84 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 597 | 860 | 8.1211E-87 | - |
| CDD | cd14066 | STKc_IRAK | 1227 | 1492 | 5.9488E-84 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 416 | 503 | 8.7E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 961 | 1025 | 5.4E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 311 | 388 | 5.7E-10 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1223 | 1492 | 1.1E-43 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 1040 | 1135 | 3.7E-13 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 594 | 857 | 4.7E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1196 | 1492 | 4.99E-75 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 576 | 886 | 2.02E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 1033 | 1138 | 4.6E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 401 | 506 | 1.0E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 940 | 1027 | 2.8E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1299 | 1500 | 5.2E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 566 | 666 | 3.8E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1195 | 1296 | 3.6E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 668 | 872 | 2.6E-59 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 288 | 390 | 1.8E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 1221 | 1492 | 2.6E-28 | IPR000719 |
| SMART | SM00220 | serkin_6 | 591 | 860 | 5.3E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 289 | 390 | 16.74231 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 398 | 506 | 16.063402 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1033 | 1138 | 16.61558 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 591 | 877 | 38.223297 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1221 | 1512 | 36.612019 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 921 | 1027 | 13.700804 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1227 | 1249 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1342 | 1354 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 597 | 619 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 88 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 4.96E-161 |
| RefSeq | XP_039851139.1 | cysteine-rich receptor-like protein kinase 2 [Panicum virgatum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 4.78E-160 | |
| TrEMBL | A0A5J9VDP5 | Cysteine-rich receptor-like protein kinase 2 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15934 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology