Basic Information
Locus ID:
CH02.2246
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 26650402 | 26651703 | - | CH02.2246 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.95 | 46,559.17 Da | 44.09 | 78.78 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 90 | 385 | 1.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 100 | 393 | 2.16E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 412 | 2.6E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 85 | 177 | 4.7E-5 | - |
| SMART | SM00219 | tyrkin_6 | 100 | 348 | 1.9E-5 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 87 | 385 | 34.152706 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 208 | 220 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 1.97E-35 |
| RefSeq | XP_002462879.1 | putative cyclin-dependent kinase F-2 [Sorghum bicolor] | 3.39E-195 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 2.56E-54 | |
| TrEMBL | A0A3L6SZV5 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G35840 PE=4 SV=1 | 7.9E-228 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH05.3388, BH02.2066, BH05.3383, BH05.3388, CH02.2246 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0125170, gene-QOZ80_2BG0180810 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0202600.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 10 | gene-QYE76_004059, gene-QYE76_004065, gene-QYE76_013555 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_02G052200, gene-BS78_02G052500, gene-BS78_K027400 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0304003, Pt_Chr0505477 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G398900, Tel5E01G283300 |
| Poaceae | Triticum aestivum | 5 | TraesCS1B02G252500.1.cds1, TraesCS2A02G502000.1.cds1 ... |