Basic Information
Locus ID:
CH02.2140
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 25238607 | 25243423 | + | CH02.2140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 59,564.57 Da | 42.73 | 65.87 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 423 | 536 | 1.4E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 359 | 419 | 2.93E-7 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 235 | 279 | 8.41E-6 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 422 | 537 | 7.13E-18 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 139 | 191 | 3.2E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 392 | 545 | 1.0E-25 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 250 | 287 | 5.3E-6 | - |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 366 | 545 | 68.283951 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 248 | 292 | 8.546775 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 139 | 189 | 9.438368 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 101 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 1.31E-72 |
| RefSeq | XP_039813639.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Panicum virgatum] | 5.71E-208 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 2.25E-136 | |
| TrEMBL | A0A8T0RRY3 | SAM-dependent MTase DRM-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG286162 PE=3 SV=1 | 1.29E-206 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology