Basic Information
Locus ID:
CH02.1796
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 17543519 | 17546626 | - | CH02.1796 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 51,434.97 Da | 45.15 | 75.04 | -0.20 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025815544.1 | F-box protein SKIP23-like [Panicum hallii] | 5.4E-223 |
| TrEMBL | A0A2S3HVM3 | DUF295 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G343900 PE=4 SV=1 | 1.7E-223 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 2 | scaffold011975G000010, scaffold011975G000020 |
| Arecaceae | Phoenix dactylifera | 6 | gene-LOC103706177, gene-LOC103706178, gene-LOC103706179 ... |
| Poaceae | Echinochloa crus-galli | 5 | AH02.1573, BH02.1636, BH03.3027, BH08.1454, CH02.1796 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0526740, gene-QOZ80_6AG0526750 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_007157, gene-QYE76_007159, gene-QYE76_007164 ... |
| Poaceae | Oryza coarctata | 2 | Oco07G000270, Oco07G000280 |
| Poaceae | Oryza sativa | 2 | LOC_Os04g08500.1, LOC_Os04g08510.1 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G006640, Chr14G009370, Chr18G003570, Chr22G013780 |
| Poaceae | Thinopyrum elongatum | 4 | Tel5E01G565100, Tel5E01G565200, Tel5E01G565300 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G353100.1.cds1, TraesCS5B02G355300.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb131340_P005 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g29929 |