Basic Information
Locus ID:
CH02.1725
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 16520994 | 16533648 | + | CH02.1725 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.17 | 188,461.80 Da | 61.84 | 67.75 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 386 | 652 | 3.49671E-99 | - |
| Pfam | PF00069 | Protein kinase domain | 381 | 648 | 1.3E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 655 | 7.82E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 456 | 663 | 4.6E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 455 | 1.3E-33 | - |
| SMART | SM00220 | serkin_6 | 380 | 651 | 6.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 380 | 638 | 38.760387 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 386 | 409 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 502 | 514 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 690 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1023 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1297 | 1313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1314 | 1329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1540 | 1554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1575 | 1618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1598 | 1618 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1491 | 1557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1288 | 1358 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 1.55E-213 |
| RefSeq | XP_039847438.1 | probable receptor-like protein kinase At5g18500 [Panicum virgatum] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 5.72E-196 | |
| TrEMBL | A0A368R569 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_5G154300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||