Basic Information
Locus ID:
CH02.1674
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 15928881 | 15930147 | + | CH02.1674 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 45,659.49 Da | 34.94 | 81.15 | -0.22 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034598267.1 | putative F-box protein At4g17565 [Setaria viridis] | 5.13E-153 |
| TrEMBL | K3XSD8 | DUF295 domain-containing protein OS=Setaria italica OX=4555 GN=101772586 PE=4 SV=1 | 7.15E-148 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 18 | AH02.1462, AH05.3101, AH06.1727, AH09.2454, AH09.2531 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_1AG0014690, gene-QOZ80_1AG0014700 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_049542, gene-QYE76_059872, gene-QYE76_059876 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_06G227700, gene-BS78_06G262500 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr17G013480, Chr23G002270, Chr26G017100 |
| Poaceae | Zea mays | 3 | Zm00001eb068140_P001, Zm00001eb171130_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-12239, nbis-gene-23041, nbis-gene-6051 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20571, Zma_g22113 |