Basic Information
Locus ID:
CH02.1611
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 15111438 | 15114506 | + | CH02.1611 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 58,756.85 Da | 45.67 | 78.65 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01158 | Ribosomal protein L36e | 82 | 176 | 6.4E-33 | IPR000509 |
| SUPERFAMILY | SSF81383 | F-box domain | 183 | 230 | 4.97E-7 | IPR036047 |
| Gene3D | G3DSA:1.10.10.1760 | 60S ribosomal protein L36 | 74 | 181 | 2.1E-34 | IPR038097 |
| ProSitePatterns | PS01190 | Ribosomal protein L36e signature. | 129 | 139 | - | IPR000509 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02450.1 | Ribosomal protein L36e family protein. | 1.13E-34 |
| RefSeq | XP_025813318.1 | uncharacterized protein LOC112890685 [Panicum hallii] | 3.08E-85 |
| Q9LZ57 | Large ribosomal subunit protein eL36x OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1 | 1.1E-33 | |
| TrEMBL | A0A835FEX9 | 60S ribosomal protein L36 OS=Digitaria exilis OX=1010633 GN=HU200_012780 PE=3 SV=1 | 4.09E-273 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology