Basic Information
Locus ID:
CH02.1542
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 14309017 | 14312282 | - | CH02.1542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 29,039.62 Da | 41.09 | 64.29 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039786723.1 | uncharacterized protein LOC120652855 [Panicum virgatum] | 3.04E-152 |
| TrEMBL | A0A2T7CEF5 | Protein FAR-RED ELONGATED HYPOCOTYL 1-like OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G525700 PE=4 SV=1 | 2.4E-151 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.4505, CH02.1542 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0242760 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0388540.1 |
| Poaceae | Oryza coarctata | 2 | Oco05G009450, Oco06G009810 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g16580.1 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0102281, Pt_Chr0102309, Pt_Chr0102311 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G030890, Chr07G003950, Chr12G008720, Chr12G008730 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G366700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG013120, gene_TRIDC4BG037270 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G096100.2, TraesCS4B02G208500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb012210_P002 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-2098, nbis-gene-3761, nbis-gene-57690 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1536 |