Basic Information
Locus ID:
CH02.1186
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 10778048 | 10784704 | - | CH02.1186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.97 | 131,852.59 Da | 58.09 | 78.92 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14137 | STKc_GSK3 | 872 | 1164 | 0.0 | IPR039192 |
| Pfam | PF00069 | Protein kinase domain | 877 | 1161 | 5.6E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 876 | 1186 | 2.02E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 957 | 1205 | 1.2E-81 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 861 | 956 | 6.1E-35 | - |
| SMART | SM00220 | serkin_6 | 877 | 1161 | 1.3E-90 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 877 | 1161 | 44.230244 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 883 | 907 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 998 | 1010 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 577 | 627 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 519 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G26751.1 | shaggy-related kinase 11. encodes a SHAGGY-related kinase involved in meristem organization. | 3.24E-258 |
| RefSeq | XP_039846907.1 | shaggy-related protein kinase alpha isoform X1 [Panicum virgatum] | 7.54E-292 |
| P43288 | Shaggy-related protein kinase alpha OS=Arabidopsis thaliana OX=3702 GN=ASK1 PE=1 SV=3 | 3.11E-257 | |
| TrEMBL | A0A8T0SHM2 | non-specific serine/threonine protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_5KG161000 PE=3 SV=1 | 1.71E-290 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH02.1186.