Basic Information
Locus ID:
CH02.1010
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH02 | 8947097 | 8948380 | + | CH02.1010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 46,072.25 Da | 49.27 | 77.70 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025815679.1 | F-box protein SKIP23-like [Panicum hallii] | 9.96E-181 |
| TrEMBL | A0A3L6R448 | DUF295 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM08G06710 PE=4 SV=1 | 7.36E-181 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH02.1208, AH08.1331, CH02.1010 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0007570, gene-QOZ80_1BG0056360 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0340140.1.CDS1 ... |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G002560, Chr05G002570, Chr05G002580 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G107500, Tel6E01G347500 |
| Poaceae | Triticum aestivum | 1 | TraesCS4D02G064300.1.cds1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14992, nbis-gene-7108 |