Basic Information
Locus ID:
CH01.734
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 5355168 | 5358626 | - | CH01.734 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 63,678.56 Da | 44.46 | 65.70 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 74 | 502 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 85 | 226 | 2.4E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 339 | 502 | 4.4E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 82 | 509 | 2.55E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 168 | 503 | 1.3E-80 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 167 | 9.3E-40 | - |
| SMART | SM00220 | serkin_6 | 85 | 502 | 4.7E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 85 | 502 | 31.933666 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 91 | 114 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 212 | 224 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 574 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 574 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 59 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 4.39E-249 |
| RefSeq | XP_004981785.1 | SRSF protein kinase 1 [Setaria italica] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 3.39E-121 | |
| TrEMBL | K4A7P4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101770816 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology