Basic Information
Locus ID:
CH01.619
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 4524333 | 4537023 | + | CH01.619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 45,333.89 Da | 32.98 | 96.55 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14132 | STKc_CK2_alpha | 65 | 380 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 84 | 380 | 3.9E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 383 | 2.81E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 84 | 160 | 1.1E-102 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 380 | 1.1E-102 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 380 | 33.841755 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 113 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50000.1 | casein kinase II, alpha chain 2. casein kinase II catalytic subunit alpha | 2.99E-219 |
| RefSeq | XP_025798430.1 | casein kinase II subunit alpha-2 [Panicum hallii] | 1.86E-260 |
| Q9AR27 | Casein kinase II subunit alpha-2 OS=Oryza sativa subsp. indica OX=39946 GN=HD6 PE=2 SV=1 | 9.52E-230 | |
| TrEMBL | A0A2S3IHW9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G077700 PE=3 SV=1 | 4.2E-259 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology