Basic Information
Locus ID:
CH01.560
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 3983175 | 3987080 | + | CH01.560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 89,738.65 Da | 47.95 | 81.67 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 203 | 249 | 6.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 467 | 663 | 6.3E-18 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 84 | 118 | 2.3E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 737 | 2.11E-39 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 297 | 7.91E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 534 | 762 | 1.2E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 320 | 3.0E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 441 | 533 | 8.5E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 742 | 19.439209 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 227 | 249 | 7.072797 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 795 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 779 | 831 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 359 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 1.4E-113 |
| RefSeq | XP_022679188.1 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Setaria italica] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 1.37E-112 | |
| TrEMBL | K4A5X1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology