Basic Information
Locus ID:
CH01.5530
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 54698931 | 54702161 | + | CH01.5530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 109,810.52 Da | 32.48 | 102.18 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 2.0E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 271 | 331 | 2.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 722 | 1004 | 1.0E-40 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 595 | 1.3E-9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 404 | 2.43E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 334 | 601 | 5.1E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 1007 | 7.52E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 811 | 1030 | 8.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 256 | 2.3E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 189 | 1.7E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 633 | 7.8E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 257 | 362 | 3.7E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 810 | 6.5E-15 | - |
| SMART | SM00369 | LRR_typ_2 | 558 | 582 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 26.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 720 | 1007 | 1.4E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 463 | 486 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 318 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 8.3 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 720 | 1014 | 35.848785 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 857 | 869 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 4.13E-166 |
| RefSeq | XP_034575566.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 8.4799999602475E-317 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 4.0E-165 | |
| TrEMBL | A0A4U6T8P3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G546800v2 PE=3 SV=1 | 1.9199999982706E-315 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology