Basic Information
Locus ID:
CH01.5502
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 54531038 | 54534508 | - | CH01.5502 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 56,285.10 Da | 57.35 | 73.12 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 222 | 487 | 3.0E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 196 | 492 | 1.15E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 181 | 294 | 1.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 295 | 502 | 3.3E-56 | - |
| SMART | SM00220 | serkin_6 | 217 | 491 | 4.0E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 217 | 491 | 38.49184 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 223 | 249 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 339 | 351 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 182 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00330.1 | calmodulin-binding receptor-like cytoplasmic kinase 2. high overall homology to CRCK1 | 2.0E-133 |
| RefSeq | XP_039830129.1 | calmodulin-binding receptor-like cytoplasmic kinase 2 [Panicum virgatum] | 4.22E-273 |
| Q8VZJ9 | Calmodulin-binding receptor-like cytoplasmic kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRCK2 PE=2 SV=1 | 1.93E-132 | |
| TrEMBL | A0A2T7CHK3 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G613800 PE=3 SV=1 | 5.78E-273 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology