Basic Information
Locus ID:
CH01.54
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 440602 | 444768 | + | CH01.54 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 101,275.74 Da | 55.38 | 75.93 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 591 | 800 | 2.8E-41 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 55 | 179 | 1.0E-5 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 55 | 183 | 6.07E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 870 | 2.32E-69 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 41 | 182 | 1.1E-6 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 563 | 665 | 6.7E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 880 | 1.5E-53 | - |
| SMART | SM00220 | serkin_6 | 591 | 849 | 3.7E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 591 | 854 | 34.930073 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 597 | 619 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 713 | 725 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 473 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 1.28E-147 |
| RefSeq | XP_039828769.1 | uncharacterized protein LOC120690245 [Panicum virgatum] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 5.07E-89 | |
| TrEMBL | A0A4U6SQ71 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G018300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2862.V1.1 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.522, BH01.211, CH01.54 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0208960, gene-QOZ80_3BG0254090 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0531390.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_060288, gene-QYE76_060318 |
| Poaceae | Oryza coarctata | 2 | Oco05G028500, Oco06G029540 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g62340.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G016700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106193 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G000760, Chr04G032270, Chr07G031320, Chr12G032230 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G807200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG052760, gene_TRIDC5BG077700 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G351900.1, TraesCS5B02G521500.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb063970_P001, Zm00001eb211040_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-15618, nbis-gene-16707, nbis-gene-56167 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2405, Zma_g83 |