Basic Information
Locus ID:
CH01.5327
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 53039400 | 53044538 | - | CH01.5327 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 79,122.56 Da | 43.52 | 83.93 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 430 | 698 | 3.01084E-90 | - |
| Pfam | PF13516 | Leucine Rich repeat | 134 | 149 | 0.74 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 426 | 695 | 9.8E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 84 | 3.2E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 159 | 219 | 1.5E-12 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 406 | 695 | 3.88E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 72 | 257 | 2.81E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 270 | 3.9E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 501 | 1.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 503 | 721 | 3.2E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 206 | 228 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 205 | 7.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 158 | 181 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 109 | 135 | 56.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 424 | 698 | 35.792248 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 160 | 182 | 7.265315 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 8.0 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 430 | 453 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 9.75E-225 |
| RefSeq | XP_025795857.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 9.37E-224 | |
| TrEMBL | A0A2S3ITK9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G579600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology