HalophFGD

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Basic Information
Locus ID: CH01.5275
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Protein of unknown function (DUF1618)
Maps and Mapping Data
Chromosome Start End Strand ID
CH01 52595470 52598726 + CH01.5275
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.90 52,204.33 Da 44.73 88.81 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 273 299 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021314214.1 uncharacterized protein LOC8056495 isoform X2 [Sorghum bicolor] 1.16E-17
TrEMBL A0A0A8YYU0 DUF1618 domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 3.04E-18
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 18 AH02.4560, AH02.4561, AH04.2086, BH01.1535, BH01.2028 ...
BH03.2330, BH04.1254, BH04.591, BH05.3109, BH05.545, BH07.2748, BH07.311, BH08.316, CH01.5234, CH01.5275, CH08.1032, Contig181.85, Contig1815.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.