Basic Information
Locus ID:
CH01.5115
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 51321125 | 51324146 | - | CH01.5115 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 39,464.20 Da | 42.83 | 103.01 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 57 | 357 | 1.1E-73 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 52 | 361 | 1.24E-80 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 44 | 356 | 1.1E-97 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 315 | 361 | 0.6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 37 | 283 | 1.6E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 44 | 358 | 49.769798 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 5.4E-160 |
| RefSeq | XP_004985165.1 | homocysteine S-methyltransferase 1 [Setaria italica] | 1.13E-222 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 1.35E-216 | |
| TrEMBL | K4ACM5 | Hcy-binding domain-containing protein OS=Setaria italica OX=4555 GN=101761102 PE=4 SV=1 | 2.56E-221 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology