Basic Information
Locus ID:
CH01.5100
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 51185280 | 51188708 | - | CH01.5100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 70,772.96 Da | 38.21 | 92.77 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 388 | 651 | 5.92146E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 65 | 1.4E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 385 | 644 | 7.2E-33 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 212 | 9.07E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 386 | 646 | 3.19E-55 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 232 | 3.4E-8 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 456 | 8.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 184 | 5.8E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 664 | 7.8E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 382 | 656 | 29.728762 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 388 | 410 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 652 | 675 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 2.89E-166 |
| RefSeq | XP_004985160.1 | probable inactive receptor kinase At1g48480 [Setaria italica] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 2.78E-165 | |
| TrEMBL | K4A6P1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101758379 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology