Basic Information
Locus ID:
CH01.5037
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 50610314 | 50613490 | - | CH01.5037 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 50,711.06 Da | 38.67 | 80.88 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 169 | 436 | 5.33688E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 167 | 432 | 7.8E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 435 | 2.15E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 138 | 238 | 1.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 239 | 447 | 1.7E-61 | - |
| SMART | SM00220 | serkin_6 | 163 | 434 | 2.1E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 163 | 442 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 285 | 297 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 169 | 191 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 471 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34500.1 | Protein kinase superfamily protein. | 4.15E-173 |
| RefSeq | XP_004985108.1 | probable receptor-like serine/threonine-protein kinase At4g34500 [Setaria italica] | 4.35E-276 |
| Q6NKZ9 | Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1 | 3.99E-172 | |
| TrEMBL | A0A835AZ70 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_044347 PE=3 SV=1 | 2.6E-276 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology