Basic Information
Locus ID:
CH01.4864
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 49256008 | 49262648 | - | CH01.4864 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.04 | 85,809.66 Da | 61.22 | 79.41 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 210 | 474 | 4.72684E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 206 | 474 | 3.1E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 186 | 474 | 1.15E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 281 | 486 | 1.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 171 | 279 | 3.6E-37 | - |
| SMART | SM00220 | serkin_6 | 204 | 474 | 1.3E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 204 | 480 | 37.884079 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 326 | 338 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 210 | 233 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 703 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 699 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09010.1 | Protein kinase superfamily protein. | 1.02E-145 |
| RefSeq | XP_004984693.1 | putative serine/threonine-protein kinase isoform X1 [Setaria italica] | 1.29E-206 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 2.04E-108 | |
| TrEMBL | K4AAY8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101781078 PE=3 SV=1 | 2.92E-205 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||