Basic Information
Locus ID:
CH01.4819
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 48913937 | 48918108 | + | CH01.4819 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.30 | 99,024.53 Da | 67.72 | 71.23 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 231 | 470 | 1.21228E-83 | - |
| Pfam | PF00069 | Protein kinase domain | 308 | 401 | 3.4E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 212 | 476 | 1.23E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 306 | 486 | 2.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 192 | 299 | 7.0E-34 | - |
| SMART | SM00220 | serkin_6 | 225 | 468 | 4.2E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 225 | 481 | 28.83832 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 315 | 327 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 231 | 253 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 722 | 742 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 742 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 795 | 923 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 879 | 923 | - | - |
| Coils | Coil | Coil | 244 | 264 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 4.58E-101 |
| RefSeq | XP_025792110.1 | proline-rich receptor-like protein kinase PERK15 [Panicum hallii] | 6.26E-271 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 4.44E-100 | |
| TrEMBL | A0A2S3IS11 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G517600 PE=4 SV=1 | 6.56E-272 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH01.4204, BH01.4522, CH01.202, CH01.4819 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0242550, gene-QOZ80_3BG0285630 |
| Poaceae | Oryza coarctata | 1 | Oco05G009310 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g16260.1, LOC_Os03g38710.1, LOC_Os09g14580.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G404200 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1549 |