Basic Information
Locus ID:
CH01.4718
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 47960396 | 47968616 | - | CH01.4718 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 103,837.27 Da | 42.16 | 75.23 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 584 | 635 | 1.7E-16 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 300 | 354 | 3.1E-9 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 56 | 113 | 1.1E-7 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 818 | 920 | 4.56E-11 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 682 | 752 | 3.5E-5 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 794 | 932 | 6.5E-8 | - |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 791 | 937 | 11.067333 | IPR000182 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 488 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37520.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 9.23E-71 |
| RefSeq | XP_034574428.1 | uncharacterized protein LOC117838490 isoform X2 [Setaria viridis] | 0 |
| TrEMBL | K4A5G9 | N-acetyltransferase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_9G450400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology