Basic Information
Locus ID:
CH01.4542
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 46479936 | 46485460 | + | CH01.4542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 111,847.87 Da | 47.91 | 73.22 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01366 | KISc_C_terminal | 400 | 723 | 8.98234E-166 | - |
| Pfam | PF00225 | Kinesin motor domain | 428 | 720 | 1.2E-103 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 43 | 162 | 1.1E-15 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 402 | 755 | 2.13E-117 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 41 | 175 | 6.97E-25 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 397 | 762 | 5.2E-129 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 28 | 179 | 1.6E-29 | IPR036872 |
| SMART | SM00033 | ch_5 | 43 | 161 | 2.1E-10 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 400 | 729 | 2.1E-163 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 41 | 163 | 18.867159 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 402 | 721 | 121.061775 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 591 | 608 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 622 | 640 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 475 | 496 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 671 | 692 | 2.9E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 948 | 1015 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 933 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 1015 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 206 | - | - |
| Coils | Coil | Coil | 728 | 748 | - | - |
| Coils | Coil | Coil | 259 | 279 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_034573271.1 | kinesin-like protein KIN-14F [Setaria viridis] | 0 |
| Q10MN5 | Kinesin-like protein KIN-14F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14F PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U6T4I8 | Kinesin-4 OS=Setaria viridis OX=4556 GN=SEVIR_9G437200v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology