Basic Information
Locus ID:
CH01.4468
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
NIN1
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 45874275 | 45879797 | + | CH01.4468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 69,347.38 Da | 54.99 | 88.02 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 139 | 580 | 6.1E-218 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 146 | 572 | 8.69E-54 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 164 | 566 | 1.5E-14 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 105 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56560.1 | Plant neutral invertase family protein. | 2.9E-307 |
| RefSeq | XP_039786372.1 | neutral/alkaline invertase 1, mitochondrial [Panicum virgatum] | 0 |
| Q10MC0 | Neutral/alkaline invertase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=NIN1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835F7X9 | Alkaline/neutral invertase OS=Digitaria exilis OX=1010633 GN=HU200_016490 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology