Basic Information
Locus ID:
CH01.442
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 3190120 | 3190625 | - | CH01.442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 13,110.62 Da | 18.06 | 81.72 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 30 | 127 | 4.21123E-43 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 40 | 121 | 3.1E-23 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 29 | 127 | 1.46E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 28 | 128 | 1.5E-32 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 30 | 128 | 35.613483 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25090.1 | early nodulin-like protein 13. | 2.33E-11 |
| RefSeq | XP_025792671.1 | basic blue protein-like [Panicum hallii] | 3.43E-61 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 4.31E-23 | |
| TrEMBL | A0A2T7C030 | Phytocyanin domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G055600 PE=4 SV=1 | 7.76E-60 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology