Basic Information
Locus ID:
CH01.428
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 3111709 | 3112488 | - | CH01.428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 17,574.95 Da | 29.41 | 90.06 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 123 | 1.82826E-46 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 117 | 5.0E-26 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 124 | 6.65E-35 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 129 | 4.4E-37 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 125 | 39.639557 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26720.1 | Cupredoxin superfamily protein. | 4.19E-26 |
| RefSeq | XP_025798160.1 | basic blue protein-like [Panicum hallii] | 2.44E-89 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 2.54E-34 | |
| TrEMBL | A0A2S3IH92 | Phytocyanin domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G056300 PE=4 SV=1 | 5.51E-88 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology