Basic Information
Locus ID:
CH01.427
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 3109398 | 3110530 | - | CH01.427 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.95 | 25,886.40 Da | 49.31 | 65.81 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 28 | 125 | 2.14149E-49 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 38 | 119 | 2.2E-25 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 27 | 126 | 1.35E-34 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 26 | 131 | 2.4E-35 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 28 | 127 | 40.663857 | IPR003245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 231 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20230.1 | blue-copper-binding protein. Al-stress-induced gene | 4.32E-20 |
| RefSeq | XP_025796343.1 | mavicyanin-like [Panicum hallii] | 1.39E-73 |
| P80728 | Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1 | 1.52E-26 | |
| TrEMBL | A0A2S3IH96 | Phytocyanin domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G056200 PE=4 SV=1 | 3.14E-72 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology