Basic Information
Locus ID:
CH01.4079
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH01 | 42776452 | 42776748 | + | CH01.4079 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.59 | 10,192.57 Da | 69.81 | 83.67 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034573156.1 | uncharacterized protein LOC117837574 isoform X2 [Setaria viridis] | 1.65E-36 |
| TrEMBL | A0A835C3L1 | CLE family OsCLE401 protein OS=Digitaria exilis OX=1010633 GN=HU200_023276 PE=4 SV=1 | 1.3E-46 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.3822, CH01.4079 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0250170, gene-QOZ80_3BG0278020 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g26180.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G339100 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr04G012420, Chr12G003790 |
| Poaceae | Zea mays | 2 | Zm00001eb018420_P001, Zm00001eb392250_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1116 |